Barcode SICOB837-18
A barcode is a DNA sequence obtained from a sample, typically an individual organism.
Details
Data for this barcode.
- Identification
- Nomia terminata
- GenBank accession
- MN346124
- BIN ID
- BOLD:ACV4384
- Catalogue number
- USNMENT01453868
- Datasets
- DS-NMNH2019 DS-SICO DS-NMNHALL DS-NMNHSEQ
- Voucher type
- Vouchered:Registered Collection
- Sample locality
- Vietnam, VN, Vinh Phuc, Tam Dao
- Geographical coordinates
- {"21.4735","105.647"}
Taxonomy
Taxonomic classification of barcode.
Sequence
DNA barcode sequence.
ACGAATAAATAATTTAAGATTTTGATTATTAATTCCATCAATTATATTATTAATATTAAG
AAGAATAACAGGATCAGGAATAGGAACAGGATGAACTGTATATCCTCCATTATCATCAAC
TACATTTCATTCTTCTATATCTGTTGACTTAGGAATTATTTCACTTCATATTGCAGGTAT
ATCTTCAATCTTAGGGGCAATAAATTTCATTACAACTATTTTTTATTCAAAAAATATCTC
AATAAATTATAATCAAATCTCATTATTCCCTTGGTCTGTAATTATTACTGCCATTTTATT
ACTTTTATCTTTACCAGTACTTGCAGGAGCTATTACTATATTATTAACTGATCGAAACTT
AAATTCTTCATTTTTTGAACCTTCAGGAGGAGGAGATCCTATTTTATATCAACATTTATT
T-----------------------------------------------------------
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Map
Where barcode was sampled.
Images
Images of sample.
- SICOB837-18 Lateral
Related barcodes
Neighbour-joining tree of sequences most similar to this barcode based on shared k-mers. Position of barcode is highlighted.
BIN map
Map of barcodes in the related set, grouped by BIN. Each BIN is enclosed by its convex hull.
t-SNE plot
t-distributed stochastic neighbor embedding (t-SNE) plot for k-mer vectors for barcodes.