Barcode GBMNE18123-21
A barcode is a DNA sequence obtained from a sample, typically an individual organism.
Details
Data for this barcode.
- Identification
- Desoria sp. 1 CC-2021a
- GenBank accession
- MZ686962
- BIN ID
- BOLD:AEK8814
- Catalogue number
- CAL9
- Sample locality
- Italy, IT
- Geographical coordinates
- {"42.469334","13.566667"}
Taxonomy
Taxonomic classification of barcode.
- k__Animalia
- p__Arthropoda
- c__Collembola
- o__Entomobryomorpha
- f__Isotomidae
- sf__Isotominae
- g__Desoria
- s__Desoria sp. 1 CC-2021a
Sequence
DNA barcode sequence.
GAACTCTATATCTAATTTTCGGGGTTTGAGCCGCTATAGTTGGCACTGCCTTTAGAGTTT
TAATTCGGTTAGAATTAGGCCAACCAGGGAGATTTATCGGTGACGACCAAATTTATAATG
TAATAGTGACAGCGCATGCTTTTGTAATAATTTTTTTTATAGTAATACCAATTATAATCG
GAGGGTTTGGTAACTGACTGATCCCATTAATAATCGGAGCCCCTGATATAGCATTCCCCC
GAATAAATAATATAAGTTTCTGACTTCTTCCCCCTTCTTTAACCCTTCTTTTATCAGGGG
GTATGGTAGAGAGAGGTGCCGGCACTGGGTGAACAGTGTACCCCCCACTATCTTCAGGGA
TTGCCCACTCTGGGGCATCTGTAGACCTCTCAATTTTTAGTCTTCATTTAGCTGGAGCCT
CCTCAATCTTAGGAGCTGTTAATTTTATTACTACTATTATTAATATACGAGCAGTAGGAA
TAACCTGAGATCGAACCCCTTTGTTTGTTTGGTCAGTATTCTTAACAGCTATTCTTCTAC
TTTTATCCCTCCCTGTTCTTGCTGGGGCTATTACAATACTACTTACAGACCGTAATTTAA
ATACCTCATTTTTTGACCCCGCTGGTGGAGGGGACCCAATCTTGTACCAACACTT
Map
Where barcode was sampled.
Related barcodes
Neighbour-joining tree of sequences most similar to this barcode based on shared k-mers. Position of barcode is highlighted.
BIN map
Map of barcodes in the related set, grouped by BIN. Each BIN is enclosed by its convex hull.
t-SNE plot
t-distributed stochastic neighbor embedding (t-SNE) plot for k-mer vectors for barcodes.