Barcode GBMA14310-15
A barcode is a DNA sequence obtained from a sample, typically an individual organism.
Details
Data for this barcode.
- Identification
- Niviventer sp.
- GenBank accession
- KF739978
- BIN ID
- BOLD:AAA8160
- Catalogue number
- YN-LC108
- Datasets
- DS-EBACMAMM DS-MAM18
Taxonomy
Taxonomic classification of barcode.
Sequence
DNA barcode sequence.
ATGTTCGTAAATCGTTGACTATTCTCAACTAATCACAAAGATATCGGAACACTGTACTTA
TTATTTGGTGCCTGAGCAGGAATAGTAGGAACAGCCCTAAGCATCTTAATTCGAGCAGAA
CTAGGACAGCCAGGTGCTCTTCTAGGTGATGACCAAATTTATAATGTAATCGTCACAGCC
CATGCATTCGTAATAATTTTCTTTATAGTAATACCAATAATGATTGGTGGTTTCGGAAAC
TGACTAGTCCCTTTAATAATTGGAGCCCCTGATATAGCATTCCCACGAATAAATAATATA
AGCTTTTGACTCCTTCCACCATCATTCCTTCTTCTATTGGCATCATCTATGGTAGAAGCC
GGAGCAGGAACAGGATGAACAGTATATCCGCCATTAGCTGGAAATTTAGCCCACGCTGGA
GCATCAGTAGACCTAACCATTTTCTCCCTCCACCTAGCTGGAGTATCCTCTATTTTAGGG
GCTATTAACTTTATTACTACTATTATTAACATAAAACCACCTGCTATGACTCAATATCAA
ACACCTCTATTTGTGTGATCAGTACTAATTACAGCCGTACTTCTACTTCTTTCACTACCA
GTACTAGCAGCGGGTATTACAATGCTTCTAACAGATCGAAATCTGAACACTACTTTCTTT
GACCCTGCTGGAGGAGGAGACCCAATTCTCTACCAACAC
Related barcodes
Neighbour-joining tree of sequences most similar to this barcode based on shared k-mers. Position of barcode is highlighted.
BIN map
Map of barcodes in the related set, grouped by BIN. Each BIN is enclosed by its convex hull.
t-SNE plot
t-distributed stochastic neighbor embedding (t-SNE) plot for k-mer vectors for barcodes.