Barcode BIPR006-13
A barcode is a DNA sequence obtained from a sample, typically an individual organism.
Details
Data for this barcode.
- Identification
- Nephotettix virescens
- GenBank accession
- KF371522
- Catalogue number
- LHCT1
- Datasets
- DS-EMCICGB0 DS-MOB113 DS-IDHETEST DS-ININD20
- Voucher type
- No Specimen
- Sample locality
- India, IN, Odisha
- Geographical coordinates
- {"20.45","85.935"}
Taxonomy
Taxonomic classification of barcode.
- k__Animalia
- p__Arthropoda
- c__Insecta
- o__Hemiptera
- f__Cicadellidae
- sf__Deltocephalinae
- t__Chiasmini
- g__Nephotettix
- s__Nephotettix virescens
Sequence
DNA barcode sequence.
ATATTTCGATCTGTGAGTAGTATTGTAATAGCTCCTGCTAACACAGGTAAAGAAAGTAGT
AGTAAAATAGCTGTAATTAATACAGACCATACAAATAAAGGAGTTCGATCTATATTTATT
CCTTTAGGTCGTATATTAATAACTGTTGAGATAAAATTTACTGCCCCTAAAATTGATGAA
ATACCTGCTAAGTGCAATGAAAAAATTGATATATCTACACTTGGTCCTGAATGAGCAATA
TTTCTTGAAAGGGGGGGGTATACTGTTCAACCTGTTCCAACCCCTATTTCTACAATAGAT
CTTATTAAAAGTAATGTTAATGAAGGAGGTAAAAGTCAAAATCTTATATTATTTAACCGT
GGAAATGCTATGTCTGGGGCTCCAATTATAATAGGTAAAAGTCAATTTCCAAAACCCCCA
ATTATAATAGGTATTACTATGAAGAAAATTATAATAAATGCATGTGATGTAACATTAACA
TTATATATTTGATCATTGTTGATCAATGACCCAGGTAGTGCTAACTCAATTCGAATAATT
ATTCTCAGTATTATTCCCACTATTCCTGATCAAATTCCAAATAAGAAATATAATGTTCCA
ATATCTTTATGACTTGTTGACCACCCCTGAACTTGATGTTTTTTTTGTCTCCCTCACC
Map
Where barcode was sampled.
Related barcodes
Neighbour-joining tree of sequences most similar to this barcode based on shared k-mers. Position of barcode is highlighted.
BIN map
Map of barcodes in the related set, grouped by BIN. Each BIN is enclosed by its convex hull.
t-SNE plot
t-distributed stochastic neighbor embedding (t-SNE) plot for k-mer vectors for barcodes.